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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
uxuAMannonate dehydratase; Catalyzes the dehydration of D-mannonate. (355 aa)    
Predicted Functional Partners:
OJG40952.1
2-dehydro-3-deoxygluconokinase.
  
 0.943
OJG43428.1
Hypothetical protein.
 
 
 0.935
OJG43419.1
Hypothetical protein.
 
 
 0.934
eda-2
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase.
 
   
 0.916
OJG40949.1
Hypothetical protein.
    
 0.913
OJG41278.1
Hypothetical protein.
 
     0.908
OJG41279.1
PTS system mannose/fructose/sorbose-specific IIB component.
 
     0.893
OJG41277.1
PTS system, mannose/fructose/sorbose family, IIA component.
 
   
 0.886
OJG44524.1
Hypothetical protein.
 
  
 0.879
OJG44473.1
Hypothetical protein.
 
  
 0.859
Your Current Organism:
Enterococcus gilvus
NCBI taxonomy Id: 160453
Other names: ATCC BAA-350, CCUG 45553, E. gilvus, Enterococcus gilvus Tyrrell et al. 2002, NBRC 100696, strain PQ1
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