Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OJG40732.1 | OJG44173.1 | RV02_GL001816 | RV02_GL001571 | Hypothetical protein. | Nicotinamide mononucleotide transporter PnuC. | 0.579 |
OJG40846.1 | OJG44173.1 | RV02_GL001700 | RV02_GL001571 | Endolysin. | Nicotinamide mononucleotide transporter PnuC. | 0.545 |
OJG41810.1 | OJG44173.1 | RV02_GL000481 | RV02_GL001571 | Hypothetical protein. | Nicotinamide mononucleotide transporter PnuC. | 0.406 |
OJG41977.1 | OJG44173.1 | RV02_GL000648 | RV02_GL001571 | Deoxynucleoside kinase. | Nicotinamide mononucleotide transporter PnuC. | 0.768 |
OJG44172.1 | OJG44173.1 | RV02_GL001570 | RV02_GL001571 | Deoxynucleoside kinase. | Nicotinamide mononucleotide transporter PnuC. | 0.872 |
OJG44173.1 | OJG40732.1 | RV02_GL001571 | RV02_GL001816 | Nicotinamide mononucleotide transporter PnuC. | Hypothetical protein. | 0.579 |
OJG44173.1 | OJG40846.1 | RV02_GL001571 | RV02_GL001700 | Nicotinamide mononucleotide transporter PnuC. | Endolysin. | 0.545 |
OJG44173.1 | OJG41810.1 | RV02_GL001571 | RV02_GL000481 | Nicotinamide mononucleotide transporter PnuC. | Hypothetical protein. | 0.406 |
OJG44173.1 | OJG41977.1 | RV02_GL001571 | RV02_GL000648 | Nicotinamide mononucleotide transporter PnuC. | Deoxynucleoside kinase. | 0.768 |
OJG44173.1 | OJG44172.1 | RV02_GL001571 | RV02_GL001570 | Nicotinamide mononucleotide transporter PnuC. | Deoxynucleoside kinase. | 0.872 |
OJG44173.1 | OJG44174.1 | RV02_GL001571 | RV02_GL001572 | Nicotinamide mononucleotide transporter PnuC. | Hypothetical protein. | 0.443 |
OJG44173.1 | recJ | RV02_GL001571 | RV02_GL003707 | Nicotinamide mononucleotide transporter PnuC. | single-stranded-DNA-specific exonuclease RecJ. | 0.412 |
OJG44174.1 | OJG44173.1 | RV02_GL001572 | RV02_GL001571 | Hypothetical protein. | Nicotinamide mononucleotide transporter PnuC. | 0.443 |
recJ | OJG44173.1 | RV02_GL003707 | RV02_GL001571 | single-stranded-DNA-specific exonuclease RecJ. | Nicotinamide mononucleotide transporter PnuC. | 0.412 |