Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OJG43761.1ABC transporter ATP-binding protein. (233 aa)    
Predicted Functional Partners:
OJG43762.1
Efflux ABC transporter permease.
 
 
 0.970
OJG42520.1
Hypothetical protein.
 
 0.904
OJG43803.1
Hypothetical protein.
  
 
 0.894
OJG41216.1
Hypothetical protein.
 
 
 0.871
OJG41612.1
Hypothetical protein.
 
 0.865
OJG43760.1
Hypothetical protein.
   
 
 0.733
OJG42686.1
Hypothetical protein.
 
 
 0.691
OJG42170.1
Hypothetical protein.
  
 
 0.632
OJG41610.1
Hypothetical protein.
  
 
 0.581
OJG37942.1
Hypothetical protein.
  
 
 0.581
Your Current Organism:
Enterococcus gilvus
NCBI taxonomy Id: 160453
Other names: ATCC BAA-350, CCUG 45553, E. gilvus, Enterococcus gilvus Tyrrell et al. 2002, NBRC 100696, strain PQ1
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