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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OJG43761.1ABC transporter ATP-binding protein. (233 aa)    
Predicted Functional Partners:
OJG43762.1
Efflux ABC transporter permease.
 
 
 0.972
OJG42520.1
Hypothetical protein.
 
 0.915
OJG43803.1
Hypothetical protein.
  
 
 0.886
OJG41612.1
Hypothetical protein.
 
 0.880
OJG41216.1
Hypothetical protein.
 
 0.879
OJG43760.1
Hypothetical protein.
   
 
 0.747
OJG42686.1
Hypothetical protein.
 
 
 0.726
OJG42170.1
Hypothetical protein.
  
 
 0.676
OJG41610.1
Hypothetical protein.
  
 
 0.599
OJG37942.1
Hypothetical protein.
  
 
 0.599
Your Current Organism:
Enterococcus gilvus
NCBI taxonomy Id: 160453
Other names: ATCC BAA-350, CCUG 45553, E. gilvus, Enterococcus gilvus Tyrrell et al. 2002, NBRC 100696, strain PQ1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.