STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OJG43500.1Hypothetical protein. (237 aa)    
Predicted Functional Partners:
aguA
Agmatine deiminase.
  
    0.611
arcC-2
Carbamate kinase; Belongs to the carbamate kinase family.
       0.609
OJG43497.1
Amino acid permease.
       0.602
OJG41210.1
Hypothetical protein; Belongs to the flavin oxidoreductase frp family.
  
  
 0.462
OJG42348.1
Hypothetical protein; Belongs to the flavin oxidoreductase frp family.
  
  
 0.462
ptcA
Putrescine carbamoyltransferase; Catalyzes the phosphorolysis of N-carbamoylputrescine to form carbamoyl phosphate and putrescine. Is involved in the degradation pathway of the polyamine agmatine.
       0.433
OJG44237.1
Hypothetical protein.
  
  
 0.425
OJG40940.1
Hypothetical protein.
  
  
 0.424
OJG40941.1
Hypothetical protein.
  
  
 0.424
OJG43817.1
Hypothetical protein.
  
  
 0.424
Your Current Organism:
Enterococcus gilvus
NCBI taxonomy Id: 160453
Other names: ATCC BAA-350, CCUG 45553, E. gilvus, Enterococcus gilvus Tyrrell et al. 2002, NBRC 100696, strain PQ1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.