Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OJG41290.1 | OJG44494.1 | RV02_GL001066 | RV02_GL000100 | 3-hexulose-6-phosphate synthase. | 6-phospho 3-hexuloisomerase. | 0.892 |
OJG41290.1 | hxlB | RV02_GL001066 | RV02_GL000077 | 3-hexulose-6-phosphate synthase. | 6-phospho 3-hexuloisomerase. | 0.951 |
OJG41290.1 | hxlB-2 | RV02_GL001066 | RV02_GL003293 | 3-hexulose-6-phosphate synthase. | 6-phospho 3-hexuloisomerase. | 0.963 |
OJG41953.1 | OJG41954.1 | RV02_GL000624 | RV02_GL000625 | Hypothetical protein. | Hypothetical protein. | 0.998 |
OJG41953.1 | OJG44494.1 | RV02_GL000624 | RV02_GL000100 | Hypothetical protein. | 6-phospho 3-hexuloisomerase. | 0.900 |
OJG41953.1 | hxlB | RV02_GL000624 | RV02_GL000077 | Hypothetical protein. | 6-phospho 3-hexuloisomerase. | 0.900 |
OJG41953.1 | hxlB-2 | RV02_GL000624 | RV02_GL003293 | Hypothetical protein. | 6-phospho 3-hexuloisomerase. | 0.900 |
OJG41953.1 | pfkA | RV02_GL000624 | RV02_GL000007 | Hypothetical protein. | 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis. | 0.906 |
OJG41953.1 | pgi | RV02_GL000624 | RV02_GL000046 | Hypothetical protein. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.907 |
OJG41953.1 | tkt | RV02_GL000624 | RV02_GL003712 | Hypothetical protein. | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | 0.930 |
OJG41954.1 | OJG41953.1 | RV02_GL000625 | RV02_GL000624 | Hypothetical protein. | Hypothetical protein. | 0.998 |
OJG41954.1 | OJG44494.1 | RV02_GL000625 | RV02_GL000100 | Hypothetical protein. | 6-phospho 3-hexuloisomerase. | 0.900 |
OJG41954.1 | hxlB | RV02_GL000625 | RV02_GL000077 | Hypothetical protein. | 6-phospho 3-hexuloisomerase. | 0.900 |
OJG41954.1 | hxlB-2 | RV02_GL000625 | RV02_GL003293 | Hypothetical protein. | 6-phospho 3-hexuloisomerase. | 0.900 |
OJG41954.1 | pfkA | RV02_GL000625 | RV02_GL000007 | Hypothetical protein. | 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis. | 0.911 |
OJG41954.1 | pgi | RV02_GL000625 | RV02_GL000046 | Hypothetical protein. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.907 |
OJG41954.1 | tkt | RV02_GL000625 | RV02_GL003712 | Hypothetical protein. | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | 0.911 |
OJG44472.1 | OJG44494.1 | RV02_GL000078 | RV02_GL000100 | Hypothetical protein. | 6-phospho 3-hexuloisomerase. | 0.988 |
OJG44472.1 | hxlA | RV02_GL000078 | RV02_GL003292 | Hypothetical protein. | 3-hexulose-6-phosphate synthase. | 0.923 |
OJG44472.1 | hxlB | RV02_GL000078 | RV02_GL000077 | Hypothetical protein. | 6-phospho 3-hexuloisomerase. | 0.997 |
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