STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OJG42421.1RDD family protein. (179 aa)    
Predicted Functional Partners:
sppA
Signal peptide peptidase SppA, 36K type.
 
  
 0.979
OJG42420.1
Hypothetical protein.
     
 0.896
tig
Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.
       0.806
OJG42423.1
Hypothetical protein.
       0.800
OJG42332.1
Hypothetical protein; Belongs to the UPF0342 family.
  
     0.683
OJG43606.1
Hypothetical protein.
 
     0.551
OJG42454.1
S4 RNA-binding protein.
  
    0.544
OJG42289.1
Hypothetical protein.
 
  
 0.504
OJG43101.1
Hypothetical protein.
  
     0.503
OJG40805.1
Hypothetical protein; Belongs to the UPF0356 family.
  
     0.495
Your Current Organism:
Enterococcus gilvus
NCBI taxonomy Id: 160453
Other names: ATCC BAA-350, CCUG 45553, E. gilvus, Enterococcus gilvus Tyrrell et al. 2002, NBRC 100696, strain PQ1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.