STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OJG79271.1Hypothetical protein. (328 aa)    
Predicted Functional Partners:
OJG80205.1
Hypothetical protein.
 
 0.868
OJG82345.1
Hypothetical protein.
    
 0.853
OJG76860.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
    
 0.839
OJG76599.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
    
 0.839
OJG79272.1
Hypothetical protein.
 
  
 0.815
OJG79273.1
Hypothetical protein.
 
   
 0.795
OJG80215.1
Hypothetical protein.
 
  
 0.769
OJG79270.1
Oxaloacetate decarboxylase.
    
  0.713
OJG81899.1
alpha-L-rhamnosidase.
 
   
 0.710
OJG80216.1
Hypothetical protein.
 
  
 0.698
Your Current Organism:
Enterococcus pallens
NCBI taxonomy Id: 160454
Other names: ATCC BAA-351, CCUG 45554, E. pallens, Enterococcus pallens Tyrrell et al. 2002, NBRC 100697, strain PQ2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.