Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OJG79196.1Hypothetical protein. (533 aa)    
Predicted Functional Partners:
OJG80609.1
LPXTG-domain-containing protein cell wall anchor domain.
 
 0.858
OJG81912.1
Hypothetical protein.
  
 0.838
OJG82006.1
Hypothetical protein.
  
 0.838
OJG77731.1
Hypothetical protein.
  
 0.838
OJG77752.1
LPXTG-domain-containing protein cell wall anchor domain.
  
 0.838
OJG77577.1
Hypothetical protein.
  
 0.838
OJG76184.1
KxYKxGKxW signal peptide.
  
 0.838
OJG76160.1
Hypothetical protein.
  
 0.838
OJG76094.1
Hypothetical protein.
  
 0.838
OJG80659.1
Hypothetical protein.
  
 0.838
Your Current Organism:
Enterococcus pallens
NCBI taxonomy Id: 160454
Other names: ATCC BAA-351, CCUG 45554, E. pallens, Enterococcus pallens Tyrrell et al. 2002, NBRC 100697, strain PQ2
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