Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OJG69398.1Hypothetical protein. (94 aa)    
Predicted Functional Partners:
OJG69400.1
glycine/betaine/sarcosine/D-proline reductase family selenoprotein B.
 
  
 0.994
OJG76690.1
Hypothetical protein.
  
 0.992
OJG76452.1
Hypothetical protein.
  
 0.992
OJG69399.1
Hypothetical protein.
 
   
 0.952
OJG76454.1
Hypothetical protein; Belongs to the proline racemase family.
 
  
 0.952
OJG76288.1
Hypothetical protein; Belongs to the proline racemase family.
 
  
 0.900
OJG76689.1
Hypothetical protein.
 
   
 0.815
OJG76453.1
Hypothetical protein.
 
   
 0.815
OJG69700.1
Hypothetical protein.
 
   
 0.804
OJG76557.1
Proline reductase.
 
     0.800
Your Current Organism:
Enterococcus pallens
NCBI taxonomy Id: 160454
Other names: ATCC BAA-351, CCUG 45554, E. pallens, Enterococcus pallens Tyrrell et al. 2002, NBRC 100697, strain PQ2
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