Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OJG78927.1Hypothetical protein. (342 aa)    
Predicted Functional Partners:
OJG76860.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
  
 
 0.882
OJG76599.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
  
 
 0.882
OJG78058.1
Hypothetical protein.
 
  
 
0.865
OJG77877.1
PTS system, Fru family, IIC component.
  
 
 0.859
OJG78325.1
Fructokinase.
  
 
 0.852
OJG77620.1
Fructokinase.
  
 
 0.852
OJG76027.1
Fructokinase domain protein.
  
 
 0.852
OJG82225.1
PTS system, fructose subfamily, IIA component.
  
 
 0.848
OJG79165.1
Hypothetical protein.
    
 0.843
OJG77339.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 
 0.841
Your Current Organism:
Enterococcus pallens
NCBI taxonomy Id: 160454
Other names: ATCC BAA-351, CCUG 45554, E. pallens, Enterococcus pallens Tyrrell et al. 2002, NBRC 100697, strain PQ2
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