Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OJG78936.1Hypothetical protein. (336 aa)    
Predicted Functional Partners:
OJG78935.1
Hypothetical protein.
 0.999
pdhA
Pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3).
 0.999
OJG78466.1
Hypothetical protein.
 0.998
OJG76260.1
Hypothetical protein.
 0.998
OJG78937.1
Pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase.
 
 0.996
OJG78462.1
Hypothetical protein.
 
 0.991
OJG76263.1
Hypothetical protein.
 
 0.991
OJG78938.1
Dihydrolipoyl dehydrogenase.
  
 0.979
OJG78463.1
Hypothetical protein.
 
 0.964
OJG77940.1
Dihydrolipoamide S-succinyltransferase.
 
 0.964
Your Current Organism:
Enterococcus pallens
NCBI taxonomy Id: 160454
Other names: ATCC BAA-351, CCUG 45554, E. pallens, Enterococcus pallens Tyrrell et al. 2002, NBRC 100697, strain PQ2
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