Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OJG78945.1Hypothetical protein. (492 aa)    
Predicted Functional Partners:
OJG77423.1
Hypothetical protein.
   
    0.638
OJG82408.1
Phosphocarrier protein HPr.
   
 0.630
OJG76084.1
Hypothetical protein.
  
 
 0.621
OJG80367.1
PTS system mannitol-specific transporter subunit IIA.
  
 
 0.621
OJG76082.1
PTS system, mannitol-specific IIC component.
  
 
 0.597
OJG80365.1
PTS system, mannitol-specific IIC component.
  
 
 0.597
OJG74397.1
Hypothetical protein.
  
 
 0.597
OJG80008.1
PTS system, mannitol-specific IIC component.
  
 
 0.597
OJG78946.1
MazG nucleotide pyrophosphohydrolase.
       0.592
OJG77789.1
Hypothetical protein.
  
 
 0.514
Your Current Organism:
Enterococcus pallens
NCBI taxonomy Id: 160454
Other names: ATCC BAA-351, CCUG 45554, E. pallens, Enterococcus pallens Tyrrell et al. 2002, NBRC 100697, strain PQ2
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