STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OJG78972.1PTS system, glucose-like IIB component. (539 aa)    
Predicted Functional Partners:
OJG79163.1
PTS system, glucose subfamily, IIA component.
 0.996
OJG79881.1
PTS system, glucose subfamily, IIA component.
 0.996
OJG76346.1
PTS system, glucose subfamily, IIA component.
 0.991
OJG78973.1
6-phospho-alpha-glucosidase 2.
 
 
 0.977
OJG79182.1
PTS system, glucose subfamily, IIA component.
 0.967
OJG79884.1
Hypothetical protein.
 
 0.958
OJG82457.1
Glucokinase.
  
 0.951
OJG80476.1
PTS system, IIBC component.
 
0.947
OJG76626.1
PTS system, N-acetylglucosamine-specific IIBC component.
 
0.946
OJG78306.1
PTS system, beta-glucoside-specific IIABC component.
 
 0.945
Your Current Organism:
Enterococcus pallens
NCBI taxonomy Id: 160454
Other names: ATCC BAA-351, CCUG 45554, E. pallens, Enterococcus pallens Tyrrell et al. 2002, NBRC 100697, strain PQ2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.