STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OJG78156.1Hypothetical protein. (472 aa)    
Predicted Functional Partners:
OJG76232.1
Adenine methyltransferase.
 
  
 0.733
OJG76230.1
Hypothetical protein.
 
    0.673
OJG77286.1
Hypothetical protein.
  
    0.623
OJG78155.1
Hypothetical protein; Belongs to the peptidase S24 family.
  
  
 0.621
OJG77307.1
Toxin secretion/phage lysis holin.
 
  
 0.595
OJG76484.1
Toxin secretion/phage lysis holin.
 
  
 0.591
OJG76429.1
Hypothetical protein.
 
  
 0.481
OJG79045.1
Hypothetical protein.
 
  
 0.446
OJG77557.1
Helicase.
 
   
 0.433
OJG76433.1
Hypothetical protein.
 
  
 0.426
Your Current Organism:
Enterococcus pallens
NCBI taxonomy Id: 160454
Other names: ATCC BAA-351, CCUG 45554, E. pallens, Enterococcus pallens Tyrrell et al. 2002, NBRC 100697, strain PQ2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.