crcB protein (Enterococcus pallens) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

crcB

Protein CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family. (102 aa)

Predicted Functional Partners:

crcB-2

0.941

OJG78174.1

0.783

OJG75075.1

0.558

OJG77400.1

0.475

OJG79320.1

0.431

OJG79538.1

0.403

Your Current Organism:

Enterococcus pallens

NCBI taxonomy Id: 160454
Other names: ATCC BAA-351, CCUG 45554, E. pallens, Enterococcus pallens Tyrrell et al. 2002, NBRC 100697, strain PQ2

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
OJG75075.1	crcB	RV10_GL004526	RV10_GL001663	Signal peptidase I; Belongs to the peptidase S26 family.	Protein CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.	0.558
OJG75075.1	crcB-2	RV10_GL004526	RV10_GL001664	Signal peptidase I; Belongs to the peptidase S26 family.	Protein CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.	0.558
OJG77400.1	crcB	RV10_GL002510	RV10_GL001663	Hypothetical protein.	Protein CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.	0.475
OJG78174.1	OJG79538.1	RV10_GL001662	RV10_GL000665	Hypothetical protein.	Capsular exopolysaccharide family protein.	0.547
OJG78174.1	crcB	RV10_GL001662	RV10_GL001663	Hypothetical protein.	Protein CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.	0.783
OJG78174.1	crcB-2	RV10_GL001662	RV10_GL001664	Hypothetical protein.	Protein CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.	0.666
OJG79320.1	crcB	RV10_GL000822	RV10_GL001663	DNA polymerase III, delta subunit.	Protein CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.	0.431
OJG79320.1	crcB-2	RV10_GL000822	RV10_GL001664	DNA polymerase III, delta subunit.	Protein CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.	0.431
OJG79538.1	OJG78174.1	RV10_GL000665	RV10_GL001662	Capsular exopolysaccharide family protein.	Hypothetical protein.	0.547
OJG79538.1	crcB	RV10_GL000665	RV10_GL001663	Capsular exopolysaccharide family protein.	Protein CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.	0.403
crcB	OJG75075.1	RV10_GL001663	RV10_GL004526	Protein CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.	Signal peptidase I; Belongs to the peptidase S26 family.	0.558
crcB	OJG77400.1	RV10_GL001663	RV10_GL002510	Protein CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.	Hypothetical protein.	0.475
crcB	OJG78174.1	RV10_GL001663	RV10_GL001662	Protein CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.	Hypothetical protein.	0.783
crcB	OJG79320.1	RV10_GL001663	RV10_GL000822	Protein CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.	DNA polymerase III, delta subunit.	0.431
crcB	OJG79538.1	RV10_GL001663	RV10_GL000665	Protein CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.	Capsular exopolysaccharide family protein.	0.403
crcB	crcB-2	RV10_GL001663	RV10_GL001664	Protein CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.	Protein CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.	0.941
crcB-2	OJG75075.1	RV10_GL001664	RV10_GL004526	Protein CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.	Signal peptidase I; Belongs to the peptidase S26 family.	0.558
crcB-2	OJG78174.1	RV10_GL001664	RV10_GL001662	Protein CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.	Hypothetical protein.	0.666
crcB-2	OJG79320.1	RV10_GL001664	RV10_GL000822	Protein CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.	DNA polymerase III, delta subunit.	0.431
crcB-2	crcB	RV10_GL001664	RV10_GL001663	Protein CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.	Protein CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.	0.941

Server load: low (20%) [HD]

Permalink

Network

Neighborhood

Experiments

Cooccurrence

Databases

Coexpression

Textmining

Fusion

© STRING Consortium 2025

Credits

Access

Info

About