Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OJG76599.1 | OJG76860.1 | RV10_GL003574 | RV10_GL003195 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | 0.999 |
OJG76599.1 | OJG81970.1 | RV10_GL003574 | RV10_GL001834 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | Hypothetical protein. | 0.807 |
OJG76599.1 | OJG81971.1 | RV10_GL003574 | RV10_GL001835 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | Aspartate 4-decarboxylase. | 0.940 |
OJG76599.1 | argB | RV10_GL003574 | RV10_GL000983 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | 0.410 |
OJG76599.1 | argG | RV10_GL003574 | RV10_GL002253 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.659 |
OJG76599.1 | argJ | RV10_GL003574 | RV10_GL000984 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | Glutamate N-acetyltransferase/amino-acid acetyltransferase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. | 0.498 |
OJG76599.1 | hisI | RV10_GL003574 | RV10_GL003474 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | phosphoribosyl-ATP diphosphatase; In the N-terminal section; belongs to the PRA-CH family. | 0.557 |
OJG76860.1 | OJG76599.1 | RV10_GL003195 | RV10_GL003574 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | 0.999 |
OJG76860.1 | OJG81970.1 | RV10_GL003195 | RV10_GL001834 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | Hypothetical protein. | 0.807 |
OJG76860.1 | OJG81971.1 | RV10_GL003195 | RV10_GL001835 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | Aspartate 4-decarboxylase. | 0.940 |
OJG76860.1 | argB | RV10_GL003195 | RV10_GL000983 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | 0.410 |
OJG76860.1 | argG | RV10_GL003195 | RV10_GL002253 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.659 |
OJG76860.1 | argJ | RV10_GL003195 | RV10_GL000984 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | Glutamate N-acetyltransferase/amino-acid acetyltransferase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. | 0.498 |
OJG76860.1 | hisI | RV10_GL003195 | RV10_GL003474 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | phosphoribosyl-ATP diphosphatase; In the N-terminal section; belongs to the PRA-CH family. | 0.557 |
OJG77408.1 | OJG77657.1 | RV10_GL002518 | RV10_GL002333 | Hypothetical protein. | Hypothetical protein. | 0.706 |
OJG77408.1 | OJG77672.1 | RV10_GL002518 | RV10_GL002348 | Hypothetical protein. | Hypothetical protein. | 0.420 |
OJG77408.1 | OJG81970.1 | RV10_GL002518 | RV10_GL001834 | Hypothetical protein. | Hypothetical protein. | 0.746 |
OJG77408.1 | OJG81971.1 | RV10_GL002518 | RV10_GL001835 | Hypothetical protein. | Aspartate 4-decarboxylase. | 0.587 |
OJG77408.1 | argB | RV10_GL002518 | RV10_GL000983 | Hypothetical protein. | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | 0.660 |
OJG77408.1 | argJ | RV10_GL002518 | RV10_GL000984 | Hypothetical protein. | Glutamate N-acetyltransferase/amino-acid acetyltransferase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. | 0.635 |
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