STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OJG81977.1Hypothetical protein. (192 aa)    
Predicted Functional Partners:
OJG76860.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
    
 0.856
OJG76599.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
    
 0.856
OJG82345.1
Hypothetical protein.
    
  0.825
OJG78233.1
Hypothetical protein.
 
     0.764
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
  
 
 0.753
OJG76493.1
Hypothetical protein.
 
   
 0.745
OJG79348.1
Hypothetical protein.
 
    0.723
OJG78940.1
Hypothetical protein.
 
     0.708
OJG82059.1
Hypothetical protein.
 
  
 0.662
OJG79560.1
Hypothetical protein.
 
     0.657
Your Current Organism:
Enterococcus pallens
NCBI taxonomy Id: 160454
Other names: ATCC BAA-351, CCUG 45554, E. pallens, Enterococcus pallens Tyrrell et al. 2002, NBRC 100697, strain PQ2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.