STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OJG76919.1Hypothetical protein. (239 aa)    
Predicted Functional Partners:
OJG79675.1
YD repeat (two copies).
  
 
 0.642
OJG76422.1
LPXTG-domain-containing protein cell wall anchor domain.
  
 
 0.638
dnaA
Chromosomal replication initiator protein dnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.
  
 
 0.612
OJG81527.1
Hypothetical protein.
  
 
 0.606
OJG81572.1
Hypothetical protein.
  
 
 0.606
OJG75075.1
Signal peptidase I; Belongs to the peptidase S26 family.
  
  
 0.593
OJG77384.1
Hypothetical protein.
    
 0.591
OJG77300.1
Hypothetical protein.
    
 0.591
OJG76946.1
Peptidoglycan-binding protein LysM.
    
 0.591
OJG72959.1
LysM protein.
    
 0.591
Your Current Organism:
Enterococcus pallens
NCBI taxonomy Id: 160454
Other names: ATCC BAA-351, CCUG 45554, E. pallens, Enterococcus pallens Tyrrell et al. 2002, NBRC 100697, strain PQ2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.