Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OJG76865.1 | OJG76866.1 | RV10_GL003200 | RV10_GL003201 | Hypothetical protein. | Signal peptide peptidase SppA, 36K type. | 0.847 |
OJG76865.1 | OJG76867.1 | RV10_GL003200 | RV10_GL003202 | Hypothetical protein. | Hypothetical protein. | 0.847 |
OJG76865.1 | OJG76868.1 | RV10_GL003200 | RV10_GL003203 | Hypothetical protein. | Hypothetical protein. | 0.814 |
OJG76865.1 | glmS | RV10_GL003200 | RV10_GL003199 | Hypothetical protein. | Glutamine-fructose-6-phosphate transaminase (isomerizing); Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.601 |
OJG76865.1 | tig | RV10_GL003200 | RV10_GL003204 | Hypothetical protein. | Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily. | 0.744 |
OJG76866.1 | OJG76865.1 | RV10_GL003201 | RV10_GL003200 | Signal peptide peptidase SppA, 36K type. | Hypothetical protein. | 0.847 |
OJG76866.1 | OJG76867.1 | RV10_GL003201 | RV10_GL003202 | Signal peptide peptidase SppA, 36K type. | Hypothetical protein. | 0.978 |
OJG76866.1 | OJG76868.1 | RV10_GL003201 | RV10_GL003203 | Signal peptide peptidase SppA, 36K type. | Hypothetical protein. | 0.860 |
OJG76866.1 | OJG81611.1 | RV10_GL003201 | RV10_GL002850 | Signal peptide peptidase SppA, 36K type. | Hypothetical protein. | 0.658 |
OJG76866.1 | OJG82559.1 | RV10_GL003201 | RV10_GL000380 | Signal peptide peptidase SppA, 36K type. | Hypothetical protein. | 0.683 |
OJG76866.1 | era | RV10_GL003201 | RV10_GL003465 | Signal peptide peptidase SppA, 36K type. | GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.510 |
OJG76866.1 | glmS | RV10_GL003201 | RV10_GL003199 | Signal peptide peptidase SppA, 36K type. | Glutamine-fructose-6-phosphate transaminase (isomerizing); Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.492 |
OJG76866.1 | infA | RV10_GL003201 | RV10_GL001204 | Signal peptide peptidase SppA, 36K type. | Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex. | 0.462 |
OJG76866.1 | rpsF | RV10_GL003201 | RV10_GL003063 | Signal peptide peptidase SppA, 36K type. | 30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. | 0.529 |
OJG76866.1 | tig | RV10_GL003201 | RV10_GL003204 | Signal peptide peptidase SppA, 36K type. | Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily. | 0.798 |
OJG76867.1 | OJG76865.1 | RV10_GL003202 | RV10_GL003200 | Hypothetical protein. | Hypothetical protein. | 0.847 |
OJG76867.1 | OJG76866.1 | RV10_GL003202 | RV10_GL003201 | Hypothetical protein. | Signal peptide peptidase SppA, 36K type. | 0.978 |
OJG76867.1 | OJG76868.1 | RV10_GL003202 | RV10_GL003203 | Hypothetical protein. | Hypothetical protein. | 0.858 |
OJG76867.1 | OJG82559.1 | RV10_GL003202 | RV10_GL000380 | Hypothetical protein. | Hypothetical protein. | 0.459 |
OJG76867.1 | glmS | RV10_GL003202 | RV10_GL003199 | Hypothetical protein. | Glutamine-fructose-6-phosphate transaminase (isomerizing); Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.423 |
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