STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OJG76818.1Hypothetical protein. (741 aa)    
Predicted Functional Partners:
OJG76816.1
comEA protein.
 
  
 0.973
OJG76817.1
ComE operon protein 2.
 
    0.958
OJG76819.1
DNA polymerase III, delta subunit.
 
   
 0.937
OJG82250.1
Hypothetical protein.
 
  
 0.901
OJG77719.1
Hypothetical protein.
 
  
 0.900
OJG82249.1
Hypothetical protein.
 
  
 0.887
OJG81284.1
comF family protein.
 
  
 0.869
OJG82580.1
DNA protecting protein DprA.
 
  
 0.862
OJG82251.1
Type II secretion system protein G.
   
  
 0.828
birA
biotin-[acetyl-CoA-carboxylase] ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
 
   
 0.823
Your Current Organism:
Enterococcus pallens
NCBI taxonomy Id: 160454
Other names: ATCC BAA-351, CCUG 45554, E. pallens, Enterococcus pallens Tyrrell et al. 2002, NBRC 100697, strain PQ2
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.