Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OJG76258.1 | OJG76951.1 | RV10_GL004104 | RV10_GL003103 | Hypothetical protein. | Sigma-54 dependent DNA-binding response regulator. | 0.430 |
OJG76258.1 | OJG77781.1 | RV10_GL004104 | RV10_GL002174 | Hypothetical protein. | Hypothetical protein. | 0.439 |
OJG76258.1 | OJG78599.1 | RV10_GL004104 | RV10_GL001381 | Hypothetical protein. | Hypothetical protein. | 0.408 |
OJG76258.1 | OJG80988.1 | RV10_GL004104 | RV10_GL003987 | Hypothetical protein. | RNA polymerase sigma-54 factor. | 0.961 |
OJG76258.1 | OJG81491.1 | RV10_GL004104 | RV10_GL002730 | Hypothetical protein. | Hypothetical protein. | 0.431 |
OJG76258.1 | rpoA | RV10_GL004104 | RV10_GL001208 | Hypothetical protein. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.691 |
OJG76258.1 | rpoB | RV10_GL004104 | RV10_GL002247 | Hypothetical protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.668 |
OJG76258.1 | rpoC | RV10_GL004104 | RV10_GL002248 | Hypothetical protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.668 |
OJG76951.1 | OJG76258.1 | RV10_GL003103 | RV10_GL004104 | Sigma-54 dependent DNA-binding response regulator. | Hypothetical protein. | 0.430 |
OJG76951.1 | OJG78820.1 | RV10_GL003103 | RV10_GL001306 | Sigma-54 dependent DNA-binding response regulator. | Hypothetical protein. | 0.432 |
OJG76951.1 | OJG80988.1 | RV10_GL003103 | RV10_GL003987 | Sigma-54 dependent DNA-binding response regulator. | RNA polymerase sigma-54 factor. | 0.947 |
OJG76951.1 | rpoA | RV10_GL003103 | RV10_GL001208 | Sigma-54 dependent DNA-binding response regulator. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.663 |
OJG76951.1 | rpoB | RV10_GL003103 | RV10_GL002247 | Sigma-54 dependent DNA-binding response regulator. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.668 |
OJG76951.1 | rpoC | RV10_GL003103 | RV10_GL002248 | Sigma-54 dependent DNA-binding response regulator. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.668 |
OJG77781.1 | OJG76258.1 | RV10_GL002174 | RV10_GL004104 | Hypothetical protein. | Hypothetical protein. | 0.439 |
OJG77781.1 | OJG78820.1 | RV10_GL002174 | RV10_GL001306 | Hypothetical protein. | Hypothetical protein. | 0.438 |
OJG77781.1 | OJG80988.1 | RV10_GL002174 | RV10_GL003987 | Hypothetical protein. | RNA polymerase sigma-54 factor. | 0.947 |
OJG77781.1 | rpoA | RV10_GL002174 | RV10_GL001208 | Hypothetical protein. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.663 |
OJG77781.1 | rpoB | RV10_GL002174 | RV10_GL002247 | Hypothetical protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.668 |
OJG77781.1 | rpoC | RV10_GL002174 | RV10_GL002248 | Hypothetical protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.668 |
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