Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OJG79944.1Hypothetical protein. (196 aa)    
Predicted Functional Partners:
OJG77635.1
Hypothetical protein.
  
 
 0.755
OJG79945.1
Hypothetical protein.
       0.741
lexA
LexA repressor; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair.
   
 
 0.725
OJG78155.1
Hypothetical protein; Belongs to the peptidase S24 family.
   
 
 0.701
OJG77193.1
Hypothetical protein.
  
 
 0.642
sigA
RNA polymerase sigma factor rpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.
   
 
 0.630
OJG79947.1
Hypothetical protein; Belongs to the DNA polymerase type-Y family.
  
    0.624
OJG80917.1
Hypothetical protein.
  
 
 0.615
OJG76825.1
Hypothetical protein.
 
    0.552
OJG79946.1
Hypothetical protein.
       0.552
Your Current Organism:
Enterococcus pallens
NCBI taxonomy Id: 160454
Other names: ATCC BAA-351, CCUG 45554, E. pallens, Enterococcus pallens Tyrrell et al. 2002, NBRC 100697, strain PQ2
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