STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
metQMethionine ABC transporter, periplasmic binding protein; Function of homologous gene experimentally demonstrated in an other organism; transporter. (256 aa)    
Predicted Functional Partners:
metI
Methionine ABC transporter, permease protein; Function of homologous gene experimentally demonstrated in an other organism; transporter.
 0.998
metP
L,D-methionine D-methionine ABC transporter - permease subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter; Transportandbindingproteins : Amino acids, peptides and amines.
 0.997
metN
Methionine ABC transporter ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
 0.995
metNB
Methionine import ATP-binding protein metN2; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
 0.988
PP_0221
Methionine ABC transporter periplasmic-binding lipoprotein (metQ-like protein); Function of homologous gene experimentally demonstrated in an other organism; transporter; Biologicalprocesses : Explore.
  
  
 
0.920
plpB
NLPA lipoprotein.
  
  
 
0.901
PP_0599
Paraquat-inducible protein B; Function of strongly homologous gene; phenotype; Unknown function.
      
 0.738
PP_2577
Putative paraquat-inducible protein B (pqiB like); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative cell process; Cellularprocesses : Detoxification.
      
 0.738
yhdZ
Putative amino acid ABC transporter - ATP-binding subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Transport and binding proteins.
 
    
 0.653
braF
High-affinity branched-chain amino acid transport ATP-binding protein BraF.
      
 0.650
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
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