STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP_0142Putative ABC transporter, permease protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (377 aa)    
Predicted Functional Partners:
PP_0141
Putative ABC transporter, ATP-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
 0.997
PP_0140
Homologs of previously reported genes of unknown function.
 
 0.996
mlaF
Phospholipid ABC transporter ATP-binding subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter; Transport and binding proteins.
 
 0.983
mlaD
Phospholipid ABC transporter binding protein; Function of homologous gene experimentally demonstrated in an other organism; transporter; Transport and binding proteins.
 
 0.977
PP_0139
Putative Lipoprotein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
  
 0.953
mlaE
Phospholipid ABC transporter; Function of homologous gene experimentally demonstrated in an other organism; transporter; Transport and binding proteins.
  
 
 
0.921
ttg2E
Toluene-tolerance protein; Function of strongly homologous gene; regulator.
  
 0.869
ttg2D
Toluene tolerance protein; Function of strongly homologous gene; regulator.
  
 
 0.867
PP_2166
Anti-anti-sigma factor.
   
   0.583
PP_4364
Putative Anti-sigma F factor antagonist; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
   
   0.583
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.