STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP_0208Putative Nitrate ABC transporter, permease protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (260 aa)    
Predicted Functional Partners:
tauB-I
ATP-binding taurine transporter subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter; Centralintermediarymetabolism : Sulfur metabolism.
 
 0.996
PP_0207
Putative Nitrate ABC transporter, periplasmic nitrate-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
  
 0.962
PP_0210
Putative Phycobiliprotein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
    0.931
tauB-II
ATP-binding taurine transporter subunit; Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Taurine importer (TC 3.A.1.17.1) family.
  
 0.884
PP_3637
Putative Sulfonate ABC transporter, ATP-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
 0.864
PP_0206
Ferredoxin, 4Fe-4S.
 
    0.863
ssuA
Aliphatic sulfonate ABC transporter - periplasmic binding protein / transport of isethionate; Function of homologous gene experimentally demonstrated in an other organism; transporter; Centralintermediarymetabolism : Sulfur metabolism.
  
 0.850
tauA
Taurine ABC transporter periplasmic binding subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter; Centralintermediarymetabolism : Sulfur metabolism.
  
 0.847
PP_3229
Putative Periplasmic aliphatic sulfonate-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
 0.847
PP_0211
Homologs of previously reported genes of unknown function.
 
    0.844
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.