Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
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Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PP_0210Putative Phycobiliprotein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (321 aa)    
Predicted Functional Partners:
PP_0211
Homologs of previously reported genes of unknown function.
 
    0.978
PP_0205
Putative Oxidoreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
    0.957
tauB-I
ATP-binding taurine transporter subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter; Centralintermediarymetabolism : Sulfur metabolism.
 
    0.948
PP_0207
Putative Nitrate ABC transporter, periplasmic nitrate-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
    0.946
PP_0206
Ferredoxin, 4Fe-4S.
 
    0.935
PP_0208
Putative Nitrate ABC transporter, permease protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
    0.934
PP_0204
Transcriptional regulator, GntR family.
     0.923
efp
Elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.
  
 0.919
PP_3211
ABC transporter, ATP-binding protein.
  
    0.529
guaA
Glutamine-hydrolyzing GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
    0.528
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
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