STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
desADelta-9 fatty acid desaturase; Function experimentally demonstrated in the studied genus; enzyme; Fatty acid and phospholipid metabolism. (394 aa)    
Predicted Functional Partners:
PP_0034
Putative bactoprenol glycosyl-transferase from phage origin; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
      
 0.642
PP_0058
Putative 1-acyl-sn-glycerol-3-phosphate acyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
  
 0.596
PP_5331
Long-chain acyl-CoA thioester hydrolase.
      
 0.588
fabA
3R-3-hydroxydecanoyl acyl carrier protein (ACP) dehydratase; Necessary for the introduction of cis unsaturation into fatty acids. Catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to E- (2)-decenoyl-ACP and then its isomerization to Z-(3)-decenoyl-ACP. Can catalyze the dehydratase reaction for beta-hydroxyacyl-ACPs with saturated chain lengths up to 16:0, being most active on intermediate chain length.
      
 0.587
PP_2783
3-oxoacyl-(Acyl-carrier-protein) reductase.
    
 
 0.561
PP_2308
Putative Acyl-CoA thioesterase II; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
      
 0.541
PP_0730
Homologs of previously reported genes of unknown function.
  
  
 0.536
PP_0218
Sensory box protein.
       0.532
PP_0216
Putative sensory box/GGDEF family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator; Signal transduction.
       0.528
accC
acetyl-CoA carboxylase - biotin carboxylase subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
   
  
 0.525
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
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