STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
metNBMethionine import ATP-binding protein metN2; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. (369 aa)    
Predicted Functional Partners:
metP
L,D-methionine D-methionine ABC transporter - permease subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter; Transportandbindingproteins : Amino acids, peptides and amines.
 0.999
PP_0221
Methionine ABC transporter periplasmic-binding lipoprotein (metQ-like protein); Function of homologous gene experimentally demonstrated in an other organism; transporter; Biologicalprocesses : Explore.
 0.997
metI
Methionine ABC transporter, permease protein; Function of homologous gene experimentally demonstrated in an other organism; transporter.
 0.993
metQ
Methionine ABC transporter, periplasmic binding protein; Function of homologous gene experimentally demonstrated in an other organism; transporter.
 0.988
plpB
NLPA lipoprotein.
 0.988
metN
Methionine ABC transporter ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
  
  
 
0.908
PP_1760
ABC transporter, ATP-binding protein.
 
     
0.900
PP_2668
ABC efflux transporter, ATP-binding protein.
 
    
0.888
PP_0222
Monooxygenase, DszA family.
  
    0.792
PP_0223
Monooxygenase, DszC family.
  
    0.788
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
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