STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
tauB-IIATP-binding taurine transporter subunit; Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Taurine importer (TC 3.A.1.17.1) family. (262 aa)    
Predicted Functional Partners:
tauC
Taurine ABC transporter permease subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter; Centralintermediarymetabolism : Sulfur metabolism.
 
 0.999
tauA
Taurine ABC transporter periplasmic binding subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter; Centralintermediarymetabolism : Sulfur metabolism.
 
 0.999
atsK
Alpha-ketoglutarate-dependent sulfonate dioxygenase; Catalyzes the alpha-ketoglutarate-dependent hydroxylation of taurine yielding sulfite and aminoacetaldehyde after decomposition of an unstable intermediate.
 
 0.987
PP_4466
Dioxygenase, TauD/TfdA family.
 
 
 0.956
PP_0169
Dioxygenase, TauD/TfdA family.
 
 
  0.945
PP_0172
ABC transporter, permease protein.
  
 0.907
cysW
Sulfate ABC transporter, inner membrane subunit CysW; Function of homologous gene experimentally demonstrated in an other organism; transporter.
 
      0.889
ssuC
Aliphatic sulfonate ABC transporter - permease subunit / transport of isethionate; Function of homologous gene experimentally demonstrated in an other organism; transporter; Centralintermediarymetabolism : Sulfur metabolism.
  
 0.888
PP_0208
Putative Nitrate ABC transporter, permease protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
 0.884
PP_2094
Putative Nitrate-binding protein NasS; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
    0.880
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
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