Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
gltR-IDNA-binding response regulator; Function of homologous gene experimentally demonstrated in an other organism; regulator. (239 aa)    
Predicted Functional Partners:
PP_0270
Sensor histidine kinase.
 
 
 0.963
PP_2402
Putative Sensor histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
 
 0.818
PP_3453
Putative Sensor protein RstB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
 
 0.816
pfeS-I
Histidine kinase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
 
 0.809
PP_4505
Sensor histidine kinase.
 
 
 0.802
pfeS-II
Histidine kinase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
 
 0.781
PP_2714
Sensor histidine kinase.
 
 
 0.776
PP_3484
Response regulator receiver protein.
  
     0.767
PP_3371
Sensor histidine kinase.
 
 
 0.762
phoR
Two-component system sensory histidine kinase; Function experimentally demonstrated in the studied strain; receptor; Centralintermediarymetabolism : Phosphorus compounds.
 
 0.756
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
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