Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
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PP_0371Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (307 aa)    
Predicted Functional Partners:
PP_5138
Putative transcriptional regulator LysR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator; Biologicalprocesses : Control; Belongs to the LysR transcriptional regulatory family.
  
    0.774
PP_4464
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.772
GbpR
Galactose-binding protein regulator; Function of strongly homologous gene; regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.771
PP_4579
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.771
PP_3934
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.763
PP_0079
Putative transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.759
PP_4494
Putative LysR-type transcriptional activator protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the LysR transcriptional regulatory family.
  
     0.751
PP_1863
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
    0.741
PP_4522
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.740
PP_5261
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.739
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
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