STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP_0429Oxidoreductase, short chain dehydrogenase/reductase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (260 aa)    
Predicted Functional Partners:
PP_2784
Oxidoreductase, short-chain dehydrogenase/reductase family.
  
 
 
 0.769
PP_1951
Oxidoreductase, short chain dehydrogenase/reductase family.
  
 
 
 0.763
PP_2002
Putative enzyme; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 
 
 0.723
hinT
Aminoacyl-adenylate hydrolase/purine nucleoside phosphoramidase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Biologicalprocesses : Maintain.
  
    0.606
PP_0430
Homologs of previously reported genes of unknown function.
  
  
 0.595
PP_3547
Putative NAD(P)-binding oxidoreductase with NAD(P)-binding Rossmann-fold domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Unknownfunction : Enzymes of unknown specificity.
  
 
 
 0.591
PP_0431
Homologs of previously reported genes of unknown function.
  
    0.531
yeaE
Methylglyoxal reductase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Unknownfunction : Enzymes of unknown specificity.
  
  
 0.513
yciK
Putative oxidoreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Fattyacidandphospholipidmetabolism : Biosynthesis.
  
 
 0.505
PP_0426
Homologs of previously reported genes of unknown function; putative membrane component; Unknown function.
  
    0.472
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
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