STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP_0544Ethanolamine transporter; Function experimentally demonstrated in the studied genus; transporter; Transport and binding proteins. (482 aa)    
Predicted Functional Partners:
eutB
Ethanolamine ammonia-lyase, alpha-subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Energymetabolism : Amino acids and amines.
 
  
 0.922
eutC
Ethanolamine ammonia-lyase, beta-subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Energymetabolism : Amino acids and amines; Belongs to the EutC family.
 
  
 0.909
aldB-I
Aldehyde dehydrogenase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Energy metabolism; Belongs to the aldehyde dehydrogenase family.
  
    0.601
yeaG
Protein kinase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Unknown function.
   
  
 0.547
PP_0541
Acetyltransferase, GNAT family.
  
    0.441
treSA
Trehalose synthase A; Function experimentally demonstrated in the studied genus; enzyme; Energymetabolism : Sugars.
   
 0.428
treSB
Fused trehalose synthase B/maltokinase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Energymetabolism : Biosynthesis and degradation of polysaccharides.
   
 0.428
glgE
Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB.
   
 0.428
yphA
Inner membrane protein of unknown function; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component; Unknown function.
     
 0.402
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.