yfhM protein (Pseudomonas putida KT2440) - STRING interaction network

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Score

yfhM

Lipoprotein of unknown function; Protects the bacterial cell from host peptidases. (1633 aa)

Predicted Functional Partners:

pbpC

0.950

mrcB

0.745

PP_0569

0.736

mrdA-I

0.657

mrdA-II

0.657

nrdR

0.482

PP_2638

0.469

eco

0.459

PP_1230

0.434

dnaA

0.426

Your Current Organism:

Pseudomonas putida KT2440

NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PP_0569	yfhM	PP_0569	PP_0570	MATE efflux family protein.	Lipoprotein of unknown function; Protects the bacterial cell from host peptidases.	0.736
PP_1230	yfhM	PP_1230	PP_0570	Homologs of previously reported genes of unknown function.	Lipoprotein of unknown function; Protects the bacterial cell from host peptidases.	0.434
PP_2638	yfhM	PP_2638	PP_0570	Putative Cellulose synthase operon C protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.	Lipoprotein of unknown function; Protects the bacterial cell from host peptidases.	0.469
dnaA	nrdR	PP_0010	PP_0513	Chromosomal replication initiator protein; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids (By similarity).	DNA-binding transcriptional repressor NrdR-Zn2+-ATP/dATP; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family.	0.402
dnaA	yfhM	PP_0010	PP_0570	Chromosomal replication initiator protein; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids (By similarity).	Lipoprotein of unknown function; Protects the bacterial cell from host peptidases.	0.426
eco	yfhM	PP_3072	PP_0570	Ecotin; General inhibitor of family S1 serine proteases.	Lipoprotein of unknown function; Protects the bacterial cell from host peptidases.	0.459
mrcB	mrdA-I	PP_4683	PP_3741	Transglycosylase/transpeptidase; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits).	Transpeptidase (penicillin-binding protein 2); Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily.	0.995
mrcB	mrdA-II	PP_4683	PP_4807	Transglycosylase/transpeptidase; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits).	Transpeptidase (penicillin-binding protein 2); Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily.	0.995
mrcB	pbpC	PP_4683	PP_0572	Transglycosylase/transpeptidase; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits).	Peptidoglycan glycosyltransferase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Cellenvelope : Biosynthesis and degradation of murein sacculus and peptidoglycan.	0.917
mrcB	yfhM	PP_4683	PP_0570	Transglycosylase/transpeptidase; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits).	Lipoprotein of unknown function; Protects the bacterial cell from host peptidases.	0.745
mrdA-I	mrcB	PP_3741	PP_4683	Transpeptidase (penicillin-binding protein 2); Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily.	Transglycosylase/transpeptidase; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits).	0.995
mrdA-I	mrdA-II	PP_3741	PP_4807	Transpeptidase (penicillin-binding protein 2); Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily.	Transpeptidase (penicillin-binding protein 2); Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily.	0.901
mrdA-I	pbpC	PP_3741	PP_0572	Transpeptidase (penicillin-binding protein 2); Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily.	Peptidoglycan glycosyltransferase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Cellenvelope : Biosynthesis and degradation of murein sacculus and peptidoglycan.	0.934
mrdA-I	yfhM	PP_3741	PP_0570	Transpeptidase (penicillin-binding protein 2); Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily.	Lipoprotein of unknown function; Protects the bacterial cell from host peptidases.	0.657
mrdA-II	mrcB	PP_4807	PP_4683	Transpeptidase (penicillin-binding protein 2); Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily.	Transglycosylase/transpeptidase; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits).	0.995
mrdA-II	mrdA-I	PP_4807	PP_3741	Transpeptidase (penicillin-binding protein 2); Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily.	Transpeptidase (penicillin-binding protein 2); Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily.	0.901
mrdA-II	pbpC	PP_4807	PP_0572	Transpeptidase (penicillin-binding protein 2); Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily.	Peptidoglycan glycosyltransferase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Cellenvelope : Biosynthesis and degradation of murein sacculus and peptidoglycan.	0.935
mrdA-II	yfhM	PP_4807	PP_0570	Transpeptidase (penicillin-binding protein 2); Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily.	Lipoprotein of unknown function; Protects the bacterial cell from host peptidases.	0.657
nrdR	dnaA	PP_0513	PP_0010	DNA-binding transcriptional repressor NrdR-Zn2+-ATP/dATP; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family.	Chromosomal replication initiator protein; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids (By similarity).	0.402
nrdR	yfhM	PP_0513	PP_0570	DNA-binding transcriptional repressor NrdR-Zn2+-ATP/dATP; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family.	Lipoprotein of unknown function; Protects the bacterial cell from host peptidases.	0.482