STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cadA-IICadmium translocating P-type ATPase; Function experimentally demonstrated in the studied genus; transporter; Biologicalprocesses : Circulate. (799 aa)    
Predicted Functional Partners:
PP_0585
Putative metal-sensitive transcriptional regulator, MerR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator; Biologicalprocesses : Control.
  
 0.920
PP_0180
Putative cytochrome c family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
   
 0.863
PP_0026
Putative cobalt/cadmium/zinc exporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Biologicalprocesses : Circulate.
  
  
 0.860
PP_0588
Putative copper-binding chaperone; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor; Biologicalprocesses : Circulate.
 
 
 0.849
fieF
Divalent cation efflux transporter; Function of homologous gene experimentally demonstrated in an other organism; transporter; Transportandbindingproteins : Cations and iron carrying compounds; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.
  
 
 0.817
PP_0947
Homologs of previously reported genes of unknown function.
 
   
 0.801
PP_0928
K+-dependent Na+/Ca+ exchanger related-protein.
 
  
 0.800
PP_4261
Cation-transporting P-type ATPase; Function of strongly homologous gene; transporter; Energymetabolism : Aerobic.
 
 
0.788
PP_1836
Putative metal transporter, ZIP family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Transport and binding proteins.
     
 0.774
cadA-I
Cadmium translocating P-type ATPase; Function experimentally demonstrated in the studied genus; transporter; Biologicalprocesses : Circulate.
 
 
0.772
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
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