PP_0620 protein (Pseudomonas putida KT2440) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

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[Homology]

Score

PP_0620

GntR family transcriptional regulator. (254 aa)

Predicted Functional Partners:

PP_0619

0.832

PP_2254

0.751

PP_4759

0.738

PP_3603

0.727

PP_3649

0.601

PP_0617

0.553

PP_0618

0.539

PP_0616

0.524

PP_4283

0.502

PP_2333

0.480

Your Current Organism:

Pseudomonas putida KT2440

NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
PP_0616	PP_0617	Branched-chain amino acid ABC transporter, ATP binding protein.	Branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.	0.999
PP_0616	PP_0618	Branched-chain amino acid ABC transporter, ATP binding protein.	Branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.	0.997
PP_0616	PP_0619	Branched-chain amino acid ABC transporter, ATP binding protein.	Branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein.	0.938
PP_0616	PP_0620	Branched-chain amino acid ABC transporter, ATP binding protein.	GntR family transcriptional regulator.	0.524
PP_0617	PP_0616	Branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.	Branched-chain amino acid ABC transporter, ATP binding protein.	0.999
PP_0617	PP_0618	Branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.	Branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.	0.999
PP_0617	PP_0619	Branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.	Branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein.	0.938
PP_0617	PP_0620	Branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.	GntR family transcriptional regulator.	0.553
PP_0618	PP_0616	Branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.	Branched-chain amino acid ABC transporter, ATP binding protein.	0.997
PP_0618	PP_0617	Branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.	Branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.	0.999
PP_0618	PP_0619	Branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.	Branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein.	0.934
PP_0618	PP_0620	Branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.	GntR family transcriptional regulator.	0.539
PP_0619	PP_0616	Branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein.	Branched-chain amino acid ABC transporter, ATP binding protein.	0.938
PP_0619	PP_0617	Branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein.	Branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.	0.938
PP_0619	PP_0618	Branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein.	Branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.	0.934
PP_0619	PP_0620	Branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein.	GntR family transcriptional regulator.	0.832
PP_0620	PP_0616	GntR family transcriptional regulator.	Branched-chain amino acid ABC transporter, ATP binding protein.	0.524
PP_0620	PP_0617	GntR family transcriptional regulator.	Branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.	0.553
PP_0620	PP_0618	GntR family transcriptional regulator.	Branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.	0.539
PP_0620	PP_0619	GntR family transcriptional regulator.	Branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein.	0.832