Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| PP_0700 | fsr-I | PP_0700 | PP_0701 | Putative Transmembrane sensor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Fosmidomycin efflux system; Function of homologous gene experimentally demonstrated in an other organism; transporter; Transport and binding proteins. | 0.540 |
| PP_0702 | fsr-I | PP_0702 | PP_0701 | Major facilitator family transporter. | Fosmidomycin efflux system; Function of homologous gene experimentally demonstrated in an other organism; transporter; Transport and binding proteins. | 0.406 |
| PP_3175 | cysG | PP_3175 | PP_3999 | Putative Dioxygenase, ferredoxin reductase component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Uroporphyrinogen-III C-methyltransferase/Precorrin-2 dehydrogenase/Sirohydrochlorin ferrochelatase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme. | 0.912 |
| PP_3175 | fsr-I | PP_3175 | PP_0701 | Putative Dioxygenase, ferredoxin reductase component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Fosmidomycin efflux system; Function of homologous gene experimentally demonstrated in an other organism; transporter; Transport and binding proteins. | 0.544 |
| PP_3175 | hmp | PP_3175 | PP_0808 | Putative Dioxygenase, ferredoxin reductase component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Flavohemoprotein; Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress; Belongs to the globin family. Two-domain flavohemoproteins subfamily. | 0.779 |
| cysG | PP_3175 | PP_3999 | PP_3175 | Uroporphyrinogen-III C-methyltransferase/Precorrin-2 dehydrogenase/Sirohydrochlorin ferrochelatase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme. | Putative Dioxygenase, ferredoxin reductase component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | 0.912 |
| cysG | fsr-I | PP_3999 | PP_0701 | Uroporphyrinogen-III C-methyltransferase/Precorrin-2 dehydrogenase/Sirohydrochlorin ferrochelatase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme. | Fosmidomycin efflux system; Function of homologous gene experimentally demonstrated in an other organism; transporter; Transport and binding proteins. | 0.599 |
| fsr-I | PP_0700 | PP_0701 | PP_0700 | Fosmidomycin efflux system; Function of homologous gene experimentally demonstrated in an other organism; transporter; Transport and binding proteins. | Putative Transmembrane sensor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | 0.540 |
| fsr-I | PP_0702 | PP_0701 | PP_0702 | Fosmidomycin efflux system; Function of homologous gene experimentally demonstrated in an other organism; transporter; Transport and binding proteins. | Major facilitator family transporter. | 0.406 |
| fsr-I | PP_3175 | PP_0701 | PP_3175 | Fosmidomycin efflux system; Function of homologous gene experimentally demonstrated in an other organism; transporter; Transport and binding proteins. | Putative Dioxygenase, ferredoxin reductase component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | 0.544 |
| fsr-I | cysG | PP_0701 | PP_3999 | Fosmidomycin efflux system; Function of homologous gene experimentally demonstrated in an other organism; transporter; Transport and binding proteins. | Uroporphyrinogen-III C-methyltransferase/Precorrin-2 dehydrogenase/Sirohydrochlorin ferrochelatase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme. | 0.599 |
| fsr-I | hmp | PP_0701 | PP_0808 | Fosmidomycin efflux system; Function of homologous gene experimentally demonstrated in an other organism; transporter; Transport and binding proteins. | Flavohemoprotein; Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress; Belongs to the globin family. Two-domain flavohemoproteins subfamily. | 0.407 |
| hmp | PP_3175 | PP_0808 | PP_3175 | Flavohemoprotein; Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress; Belongs to the globin family. Two-domain flavohemoproteins subfamily. | Putative Dioxygenase, ferredoxin reductase component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | 0.779 |
| hmp | fsr-I | PP_0808 | PP_0701 | Flavohemoprotein; Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress; Belongs to the globin family. Two-domain flavohemoproteins subfamily. | Fosmidomycin efflux system; Function of homologous gene experimentally demonstrated in an other organism; transporter; Transport and binding proteins. | 0.407 |