pilF protein (Pseudomonas putida KT2440) - STRING interaction network

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[Homology]

Score

pilF

Type IV pili biogenesis protein PilF. (255 aa)

Predicted Functional Partners:

pilN

0.909

PP_0852

0.904

pilT

0.901

pilE

0.894

pilD

0.887

pilQ

0.877

ispG

0.873

hisS

0.837

PP_0855

0.837

rlmN

0.826

Your Current Organism:

Pseudomonas putida KT2440

NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PP_0852	PP_0855	PP_0852	PP_0855	Transcriptional regulator, Cro/CI family.	Homologs of previously reported genes of unknown function.	0.856
PP_0852	hisS	PP_0852	PP_0854	Transcriptional regulator, Cro/CI family.	Histidine--tRNA ligase.	0.880
PP_0852	ispG	PP_0852	PP_0853	Transcriptional regulator, Cro/CI family.	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family.	0.957
PP_0852	pilF	PP_0852	PP_0851	Transcriptional regulator, Cro/CI family.	Type IV pili biogenesis protein PilF.	0.904
PP_0852	rlmN	PP_0852	PP_0850	Transcriptional regulator, Cro/CI family.	Dual-specificity RNA methyltransferase RlmN; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity; Belongs to the radical SAM superfamily. RlmN family.	0.875
PP_0855	PP_0852	PP_0855	PP_0852	Homologs of previously reported genes of unknown function.	Transcriptional regulator, Cro/CI family.	0.856
PP_0855	hisS	PP_0855	PP_0854	Homologs of previously reported genes of unknown function.	Histidine--tRNA ligase.	0.985
PP_0855	ispG	PP_0855	PP_0853	Homologs of previously reported genes of unknown function.	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family.	0.824
PP_0855	pilF	PP_0855	PP_0851	Homologs of previously reported genes of unknown function.	Type IV pili biogenesis protein PilF.	0.837
PP_0855	rlmN	PP_0855	PP_0850	Homologs of previously reported genes of unknown function.	Dual-specificity RNA methyltransferase RlmN; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity; Belongs to the radical SAM superfamily. RlmN family.	0.783
hisS	PP_0852	PP_0854	PP_0852	Histidine--tRNA ligase.	Transcriptional regulator, Cro/CI family.	0.880
hisS	PP_0855	PP_0854	PP_0855	Histidine--tRNA ligase.	Homologs of previously reported genes of unknown function.	0.985
hisS	ispG	PP_0854	PP_0853	Histidine--tRNA ligase.	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family.	0.943
hisS	pilF	PP_0854	PP_0851	Histidine--tRNA ligase.	Type IV pili biogenesis protein PilF.	0.837
hisS	rlmN	PP_0854	PP_0850	Histidine--tRNA ligase.	Dual-specificity RNA methyltransferase RlmN; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity; Belongs to the radical SAM superfamily. RlmN family.	0.861
ispG	PP_0852	PP_0853	PP_0852	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family.	Transcriptional regulator, Cro/CI family.	0.957
ispG	PP_0855	PP_0853	PP_0855	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family.	Homologs of previously reported genes of unknown function.	0.824
ispG	hisS	PP_0853	PP_0854	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family.	Histidine--tRNA ligase.	0.943
ispG	pilF	PP_0853	PP_0851	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family.	Type IV pili biogenesis protein PilF.	0.873
ispG	rlmN	PP_0853	PP_0850	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family.	Dual-specificity RNA methyltransferase RlmN; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity; Belongs to the radical SAM superfamily. RlmN family.	0.907