STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP_1013Sensor histidine kinase. (484 aa)    
Predicted Functional Partners:
gltR-II
DNA-binding response regulator; Function of homologous gene experimentally demonstrated in an other organism; regulator.
 
 0.962
PP_2403
Chemotaxis protein CheY.
 
 0.811
gtsA
Mannose/glucose ABC transporter, glucose-binding periplasmic protein; Function experimentally demonstrated in the studied strain; transporter; Transport and binding proteins.
 
    0.769
gltR-I
DNA-binding response regulator; Function of homologous gene experimentally demonstrated in an other organism; regulator.
 
 0.759
aruR
Transcriptional regulatory protein AruR.
 
 0.745
glk
Glucokinase; Function experimentally demonstrated in the studied strain; enzyme; Energymetabolism : Sugars; Belongs to the bacterial glucokinase family.
  
    0.737
gtsB
Mannose/glucose ABC transporter, permease protein; Function experimentally demonstrated in the studied strain; transporter; Transport and binding proteins.
 
  
 0.671
edd
Phosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family.
  
  
 0.669
gtsC
Mannose/glucose ABC transporter, permease protein; Function experimentally demonstrated in the studied strain; transporter; Transport and binding proteins.
 
    0.649
PP_3728
Sensor histidine kinase/response regulator.
 
 
 0.595
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
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