Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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experimentally determined
co-expression
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gene co-occurrence
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[Homology]
Score
PP_1236Putative Glycine cleavage system transcriptional repressor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (186 aa)    
Predicted Functional Partners:
PP_1235
AhpC/TSA family protein.
  
    0.903
PP_1245
Homologs of previously reported genes of unknown function.
   
  
 0.870
PP_2486
NADH-dependent flavin oxidoreductase, Oye family.
   
  
 0.866
gcvT-II
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine.
     
 0.767
PP_1238
Putative Lipoprotein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
    0.761
ybeZ
Putative protein with nucleoside triphosphate hydrolase domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Transport and binding proteins.
   
  
 0.713
rmd
Oxidoreductase Rmd.
      
 0.702
PP_1239
Metallo-beta-lactamase family protein.
  
    0.701
lptC
Conserved exported protein of unknown function; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. Facilitates the transfer of LPS from the inner membrane to the periplasmic protein LptA. Could be a docking site for LptA.
  
    0.683
purC
Phosphoribosylaminoimidazole-succinocarboxamide synthase; Belongs to the SAICAR synthetase family.
  
    0.675
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
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