STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP_1358Putative heme iron utilization protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Unknownfunction : Enzymes of unknown specificity. (264 aa)    
Predicted Functional Partners:
PP_1357
Homologs of previously reported genes of unknown function; Unknown function.
  
    0.716
PP_0524
Putative Periplasmic cobalamin-binding protein HutB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
    0.707
PP_1359
Homologs of previously reported genes of unknown function.
       0.643
PP_2418
Putative cobalamin ABC transporter, periplasmic; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
    0.619
PP_4881
Putative Iron ABC transporter, periplasmic iron-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
   
    0.527
fbpA
Putative iron(III)|iron ABC transporter, periplasmic iron-binding protein; Function of homologous gene experimentally demonstrated in an other organism; transporter; Transportandbindingproteins : Cations and iron carrying compounds.
   
    0.527
PP_0180
Putative cytochrome c family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
   
    0.526
PP_5699
Putative iron uptake protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Transportandbindingproteins : Cations and iron carrying compounds.
   
    0.525
gltB
L-glutamate synthase(NADPH) alpha subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Aminoacidbiosynthesis : Glutamate family.
     
 0.520
PP_2416
Putative Iron ABC transporter, ATP-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
  
 0.493
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
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