Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PP_1363 | PP_1364 | PP_1363 | PP_1364 | Homologs of previously reported genes of unknown function. | Homologs of previously reported genes of unknown function. | 0.767 |
PP_1363 | pykA | PP_1363 | PP_1362 | Homologs of previously reported genes of unknown function. | Pyruvate kinase II; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Energymetabolism : Anaerobic; Belongs to the pyruvate kinase family. | 0.559 |
PP_1363 | sbcB | PP_1363 | PP_1365 | Homologs of previously reported genes of unknown function. | Function of homologous gene experimentally demonstrated in an other organism; enzyme; DNAmetabolism : DNA replication, recombination, and repair. | 0.589 |
PP_1364 | PP_1363 | PP_1364 | PP_1363 | Homologs of previously reported genes of unknown function. | Homologs of previously reported genes of unknown function. | 0.767 |
PP_1364 | pykA | PP_1364 | PP_1362 | Homologs of previously reported genes of unknown function. | Pyruvate kinase II; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Energymetabolism : Anaerobic; Belongs to the pyruvate kinase family. | 0.551 |
PP_1364 | sbcB | PP_1364 | PP_1365 | Homologs of previously reported genes of unknown function. | Function of homologous gene experimentally demonstrated in an other organism; enzyme; DNAmetabolism : DNA replication, recombination, and repair. | 0.664 |
pykA | PP_1363 | PP_1362 | PP_1363 | Pyruvate kinase II; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Energymetabolism : Anaerobic; Belongs to the pyruvate kinase family. | Homologs of previously reported genes of unknown function. | 0.559 |
pykA | PP_1364 | PP_1362 | PP_1364 | Pyruvate kinase II; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Energymetabolism : Anaerobic; Belongs to the pyruvate kinase family. | Homologs of previously reported genes of unknown function. | 0.551 |
pykA | sbcB | PP_1362 | PP_1365 | Pyruvate kinase II; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Energymetabolism : Anaerobic; Belongs to the pyruvate kinase family. | Function of homologous gene experimentally demonstrated in an other organism; enzyme; DNAmetabolism : DNA replication, recombination, and repair. | 0.424 |
sbcB | PP_1363 | PP_1365 | PP_1363 | Function of homologous gene experimentally demonstrated in an other organism; enzyme; DNAmetabolism : DNA replication, recombination, and repair. | Homologs of previously reported genes of unknown function. | 0.589 |
sbcB | PP_1364 | PP_1365 | PP_1364 | Function of homologous gene experimentally demonstrated in an other organism; enzyme; DNAmetabolism : DNA replication, recombination, and repair. | Homologs of previously reported genes of unknown function. | 0.664 |
sbcB | pykA | PP_1365 | PP_1362 | Function of homologous gene experimentally demonstrated in an other organism; enzyme; DNAmetabolism : DNA replication, recombination, and repair. | Pyruvate kinase II; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Energymetabolism : Anaerobic; Belongs to the pyruvate kinase family. | 0.424 |