Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PP_1368Putative membrane protein containing a glycosyltransferase domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Unknownfunction : Enzymes of unknown specificity. (330 aa)    
Predicted Functional Partners:
PP_1369
Homologs of previously reported genes of unknown function.
 
    0.971
PP_1370
Glycosyl transferase, group 1 family protein.
 
    0.935
PP_1344
Homologs of previously reported genes of unknown function.
  
     0.648
PP_0128
Homologs of previously reported genes of unknown function.
 
  
 0.636
PP_1372
Homologs of previously reported genes of unknown function.
  
    0.494
htrG
Putative signal transduction protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
  
   
 0.487
PP_0330
Hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.485
PP_4775
Homologs of previously reported genes of unknown function; Unknown function.
  
     0.479
PP_5561
Homologs of previously reported genes of unknown function; Unknown function.
  
     0.474
PP_2377
Putative acetyltransferase Act; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Unknownfunction : Enzymes of unknown specificity.
 
   
 0.461
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
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