Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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[Homology]
Score
PP_1416Putative Tricarboxylate transport protein TctA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (504 aa)    
Predicted Functional Partners:
PP_1417
Putative Tricarboxylate transport protein TctB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
  
 0.993
PP_1418
Putative Tricarboxylate transport protein TctC; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
  
 0.987
PP_1415
Putative membrane associated enzyme subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
    0.933
opdH
Tricarboxylate-specific outer membrane porin; Function experimentally demonstrated in the studied genus; transporter; Transportandbindingproteins : Porins.
  
    0.761
PP_1421
Putative Sensor histidine kinase TctE; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
   
 0.754
PP_3955
Permease; Function of strongly homologous gene; transporter.
  
   
 0.671
PP_1168
Putative TRAP dicarboxylate transporter, DctQ subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
   
 0.642
tctD
Transcriptional regulatory protein tctD.
       0.609
PP_1167
Putative TRAP dicarboxylate transporter, DctM subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
   
 0.579
PP_3954
Periplasmic binding subunit of unknown solute; Function of strongly homologous gene; transporter.
  
   
 0.576
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
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