Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PP_1562Putative Phage terminase, small subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (127 aa)    
Predicted Functional Partners:
dsbA
Thiol:disulfide interchange protein; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Proteinfate : Protein folding and stabilization.
      
 0.867
regA
Photosynthetic apparatus regulatory protein RegA.
      
 0.819
PP_1563
Putative Phage terminase, large subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
    0.773
PP_1565
Phage portal protein, HK97 family.
  
  
 0.755
sspB
ClpXP protease specificity-enhancing factor; Function of homologous gene experimentally demonstrated in an other organism; factor; Cellularprocesses : Adaptations to atypical conditions.
      
 0.741
PP_1564
Homologs of previously reported genes of unknown function.
       0.678
PP_1566
Peptidase U35.
  
  
 0.671
PP_1561
Putative Phage holin; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
    0.606
PP_1567
Capsid protein.
  
  
 0.593
PP_1569
Homologs of previously reported genes of unknown function.
  
  
 0.519
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
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