Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
fklB-IIFKBP-type peptidyl-prolyl cis-trans isomerase; Function of strongly homologous gene; enzyme; Proteinfate : Protein folding and stabilization. (250 aa)    
Predicted Functional Partners:
PP_4313
Putative peptidylprolyl isomerase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
    
0.897
htpG
Chaperone protein HtpG; Molecular chaperone. Has ATPase activity.
    
 0.592
PP_1716
Transcriptional regulator, Cro/CI family.
       0.589
PP_1717
Homologs of previously reported genes of unknown function.
       0.585
PP_1689
Putative Long-chain fatty acid transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
    
 
 0.568
PP_1715
Homologs of previously reported genes of unknown function.
       0.566
bamD
Outer membrane protein assembly factor BamD; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
   
 
 0.561
PP_1430
Putative periplasmic serine endoprotease DegP-like; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the peptidase S1C family.
  
 
 0.535
apaH
Bis(5'-nucleosyl)-tetraphosphatase, symmetrical; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family.
    
 0.526
infA
Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.
   
   0.518
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
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