STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP_1723Putative 2-aminoethylphosphonate transport system permease; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Transport and binding proteins. (264 aa)    
Predicted Functional Partners:
PP_1724
Putative ABC-type 2-aminoethylphosphonate transporter permease; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Transport and binding proteins.
 
  0.999
PP_1726
ABC transporter, periplasmic binding protein.
    0.985
PP_1722
ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
  
 0.969
PP_1725
Homologs of previously reported genes of unknown function.
 
    0.957
PP_1721
Putative phosphoserine phosphatase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
    0.873
PP_1727
Transcriptional regulator, GntR family.
 
  
 0.696
PP_3815
Polyamine ABC transporter, permease protein.
 
  
 0.687
PP_0413
Polyamine ABC transporter, permease protein.
 
  
 0.586
fbpC
Ferric iron ABC transporter, ATP-binding protein; Function of strongly homologous gene; transporter; Belongs to the ABC transporter superfamily.
  
 0.573
spuG
Spermidine/putrescine ABC transporter - inner membrane subunit; Function experimentally demonstrated in the studied genus; transporter; Centralintermediarymetabolism : Polyamine biosynthesis.
 
  
 0.558
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
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