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Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PP_1726ABC transporter, periplasmic binding protein. (354 aa)    
Predicted Functional Partners:
PP_1723
Putative 2-aminoethylphosphonate transport system permease; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Transport and binding proteins.
  
 0.991
PP_1725
Homologs of previously reported genes of unknown function.
 
    0.986
PP_1724
Putative ABC-type 2-aminoethylphosphonate transporter permease; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Transport and binding proteins.
 
  
 0.955
PP_1722
ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  
 0.941
PP_1727
Transcriptional regulator, GntR family.
 
   
 0.833
PP_1721
Putative phosphoserine phosphatase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
     0.662
PP_5136
ABC transporter, permease protein.
 
  
 0.535
PP_4882
Iron ABC transporter, permease protein.
  
  
 0.472
PP_5195
Putative Iron ABC transporter, permease protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
  
 0.472
PP_2651
Major facilitator family transporter.
 
    0.410
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
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