STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP_1747Conserved protein of unknown function, UPF0270 family; Homologs of previously reported genes of unknown function; Unknown function; Belongs to the UPF0270 family. (75 aa)    
Predicted Functional Partners:
PP_1748
Homologs of previously reported genes of unknown function.
       0.759
asnB
Asparagine synthetase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
    0.655
PP_1749
GNAT family acetyltransferase; Function experimentally demonstrated in the studied genus; enzyme; Central intermediary metabolism.
       0.652
PP_4931
Homologs of previously reported genes of unknown function.
  
     0.606
PP_1663
Homologs of previously reported genes of unknown function.
  
     0.575
PP_1523
Homologs of previously reported genes of unknown function.
  
     0.549
cti
Esterified fatty acid cis/trans isomerase; Function experimentally demonstrated in the studied species; enzyme; Fattyacidandphospholipidmetabolism : Biosynthesis.
  
     0.549
sahR
Transcriptional regulator of methionine metabolism; Function of homologous gene experimentally demonstrated in an other organism; regulator.
  
     0.516
PP_0938
Homologs of previously reported genes of unknown function.
  
     0.511
PP_4517
Homologs of previously reported genes of unknown function; Belongs to the UPF0149 family.
  
     0.499
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.