Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| PP_0662 | PP_2533 | PP_0662 | PP_2533 | Putative Threonine synthase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | D-isomer specific 2-hydroxyacid dehydrogenase family protein. | 0.404 |
| PP_0662 | aroA | PP_0662 | PP_1770 | Putative Threonine synthase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.495 |
| PP_0662 | cysK | PP_0662 | PP_4571 | Putative Threonine synthase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Cysteine synthase A; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Aminoacidbiosynthesis : Serine family; Belongs to the cysteine synthase/cystathionine beta- synthase family. | 0.553 |
| PP_0662 | pdxA | PP_0662 | PP_0402 | Putative Threonine synthase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | 4-hydroxythreonine-4-phosphate dehydrogenase; Catalyzes the NAD(P)-dependent oxidation of 4-(phosphooxy)-L- threonine (HTP) into 2-amino-3-oxo-4-(phosphooxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP). | 0.903 |
| PP_0662 | pdxB | PP_0662 | PP_2117 | Putative Threonine synthase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Erythronate-4-phosphate dehydrogenase; Catalyzes the oxidation of erythronate-4-phosphate to 3- hydroxy-2-oxo-4-phosphonooxybutanoate. | 0.402 |
| PP_0662 | pheA | PP_0662 | PP_1769 | Putative Threonine synthase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Chorismate mutase/Prephenate dehydratase; Function of strongly homologous gene; enzyme. | 0.538 |
| PP_0662 | serA | PP_0662 | PP_5155 | Putative Threonine synthase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | D-3-phosphoglycerate dehydrogenase / alpha-ketoglutarate reductase; Function experimentally demonstrated in the studied species; enzyme; Aminoacidbiosynthesis : Serine family; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.404 |
| PP_0662 | serC | PP_0662 | PP_1768 | Putative Threonine synthase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Phosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily. | 0.943 |
| PP_0662 | thrC | PP_0662 | PP_1471 | Putative Threonine synthase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Threonine synthase. | 0.907 |
| PP_2533 | PP_0662 | PP_2533 | PP_0662 | D-isomer specific 2-hydroxyacid dehydrogenase family protein. | Putative Threonine synthase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | 0.404 |
| PP_2533 | aroA | PP_2533 | PP_1770 | D-isomer specific 2-hydroxyacid dehydrogenase family protein. | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.418 |
| PP_2533 | serA | PP_2533 | PP_5155 | D-isomer specific 2-hydroxyacid dehydrogenase family protein. | D-3-phosphoglycerate dehydrogenase / alpha-ketoglutarate reductase; Function experimentally demonstrated in the studied species; enzyme; Aminoacidbiosynthesis : Serine family; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.907 |
| PP_2533 | serC | PP_2533 | PP_1768 | D-isomer specific 2-hydroxyacid dehydrogenase family protein. | Phosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily. | 0.969 |
| PP_2533 | thrC | PP_2533 | PP_1471 | D-isomer specific 2-hydroxyacid dehydrogenase family protein. | Threonine synthase. | 0.404 |
| aroA | PP_0662 | PP_1770 | PP_0662 | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | Putative Threonine synthase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | 0.495 |
| aroA | PP_2533 | PP_1770 | PP_2533 | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | D-isomer specific 2-hydroxyacid dehydrogenase family protein. | 0.418 |
| aroA | pdxB | PP_1770 | PP_2117 | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | Erythronate-4-phosphate dehydrogenase; Catalyzes the oxidation of erythronate-4-phosphate to 3- hydroxy-2-oxo-4-phosphonooxybutanoate. | 0.418 |
| aroA | pheA | PP_1770 | PP_1769 | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | Chorismate mutase/Prephenate dehydratase; Function of strongly homologous gene; enzyme. | 0.999 |
| aroA | serA | PP_1770 | PP_5155 | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | D-3-phosphoglycerate dehydrogenase / alpha-ketoglutarate reductase; Function experimentally demonstrated in the studied species; enzyme; Aminoacidbiosynthesis : Serine family; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.418 |
| aroA | serB | PP_1770 | PP_4909 | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | Phosphoserine phosphatase; Function experimentally demonstrated in the studied genus; enzyme; Aminoacidbiosynthesis : Serine family. | 0.527 |
page 1 of 4